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Flagship Ventures

Venture capital

Cambridge · 3 people tracked

Also known as Flagship Capital Management Inc

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Fund manager profile

Flagship Ventures is a venture fund manager based in Cambridge. SEC filings show 2 venture funds on record, most recently Flagship Ventures Opportunities Fund I, L.P. ($350M offering) filed June 2016.

Source: SEC EDGAR Form D filings. Firm website data not yet available.

HQ
Cambridge, US
Founded
2016
Tracked investments
11
Unicorns
2
IPOs
4
Acquisitions
1

Team · 3 people

from public directories
Noubar B. Afeyan, Ph.D.· General Partner
Nicholas Gorman· Executive Officer
Thomas Hargis· Executive Officer

Founder mafia

3 people who came through Flagship Ventures went on to found or lead other companies.

What they invest in

from 10 of 11 portfolio companies

Biotech ×7Healthtech ×3Medical Devices ×3Deep Tech ×2AI & Machine Learning ×1Consumer ×1Cybersecurity ×1Digital Health ×1

HQs:United States×8Singapore×1

Investments · 11 tracked

founders shown can be your intro path

By year:2024 · 12022 · 12020 · 12016 · 12015 · 12013 · 12010 · 17 dated

Agios Pharmaceuticalsagios.comin𝕏NASDAQ: AGIO

Agios is a biopharmaceutical company developing therapies for rare diseases, with a primary focus on hemolytic anemias including pyruvate kinase deficiency, thalassemia, and sickle cell disease.

BiotechHealthtechMedical Devices

Lewis C. Cantley, Ph.D.(Founder)Tak Mak, Ph.D.(Founder)Craig B. Thompson, M.D.(Founder)Brian Goff(Chief Executive Officer)in

Co-investorsARCH Venture PartnersThird Rock VenturesSamsara BioCapital

Denali Therapeuticsdenalitherapeutics.cominNASDAQ: DNLIFeb 2024

Denali Therapeutics develops therapeutics for neurodegenerative diseases.

BiotechHealthtechMedical DevicesSan Francisco, US

Marc Tessier-Lavigne(Director)inRyan Watts(Executive Officer, Director)inAlexander O. Schuth(Executive Officer)inRyan J. Watts(President, Chief Executive Officer and Director)inCarole Ho(Executive Officer)inSteve E. Krognes(Director)in

Co-investorsARCH Venture PartnersEcoR1 CapitalF-Prime CapitalForesite CapitalGV (Google Ventures)Flagship Pioneering

Editas Medicineeditasmedicine.comin𝕏NASDAQ: EDITAug 2015

Editas Medicine develops gene editing medicines using CRISPR/Cas9 and CRISPR/Cas12a technology to treat serious diseases including blood disorders, cardiovascular conditions, and cancer.

BiotechDeep TechMedical DevicesCambridge, US

Feng Zhang(Scientific Founder, Core Member, Broad Institute of MIT and Harvard)inGeorge Church(Scientific Founder, Professor of Genetics, Harvard University and MIT)inKeith Joung(Scientific Founder, Professor of Pathology, Harvard Medical School)inDavid Liu(Scientific Founder, Professor of Chemistry and Chemical Biology, Harvard University)inKatrine Bosley(Executive Officer, Director)inVic Myer(Executive Officer)in

Co-investorsEcoR1 CapitalGV (Google Ventures)Sofinnova VenturesAtlas VentureDeerfield Management CompanyPolaris Partners

Jouleshopjoule.com𝕏

Joule is a lightweight fitness tracker (about 1.5 grams) that attaches behind existing post-style earrings to measure heart rate, calories, and daily activity, syncing to a companion phone app over Bluetooth.

ConsumerHardwareWellness & Fitness

Co-investorsWaterloo Accelerator Centre

Rubius Therapeuticsin

BiotechCambridge, US

Torben Straight Nissen(Executive Officer, Director)inJoanne Protano(Executive Officer)inDavid Epstein(Director)Harvey F. Lodish(Director)Michael Rosenblatt(Director)Roger Pomerantz(Director)in

Co-investorsFlagship PioneeringKendall Capital Partners

Seventh Senseseventhsense.aiin

Seventh Sense develops face-based biometric authentication solutions that verify identity without storing facial data, serving organizations and individuals needing secure access control, document signing, and identity verification.

AI & Machine LearningCybersecurityDeep TechDigital HealthSingapore, SG

Ashish KushwahaSam TsuiVarun Chatterji

Co-investors500 GlobalFlagship PioneeringNewpath Partners

Syros Pharmaceuticals, Inc.syros.comApr 2013

Syros Pharmaceuticals is a Massachusetts gene-control biotech developing small molecules that regulate disease gene expression.

Cambridge, US

Nancy Simonian(CEO)

Co-investorsAisling CapitalARCH Venture PartnersQuan CapitalAlexandriaAlly Bridge GroupBain Capital+11 more

T2 Biosystemst2biosystems.cominMay 2010 · $15M

HealthtechLexington, US

Michael Cima, Ph.D.(Director)Rahul Dhanda(Senior Vice President, Corporate Development)inJohn McDonough(Chief Executive Officer)inTom Lowery, Ph.D.(Chief Scientific Officer)Michael Gibbs, Esq.(Vice President and General Counsel)Joanne Spadoro, Ph.D.(Chief Operating Officer)in

Co-investorsAisling CapitalAPERTURE Venture PartnersArcus VenturesFlybridge Capital PartnersJohnson & Johnson Innovation – JJDCPolaris Partners+1 more

Tetraphase PharmaceuticalsinJan 2020acquired by La Jolla Pharmaceutical Company · Jul 2020 · $43M

Tetraphase Pharmaceuticals was a Watertown, MA biopharmaceutical company developing novel tetracycline antibiotics, including its lead drug Xerava (eravacycline) for multidrug-resistant bacterial infections.

BiotechWatertown, US

Guy Macdonald(Director)inLarry Edwards(Executive Officer, Director)inMaria Stahl(Executive Officer)inChristopher Watt(Executive Officer)

BoardL. Patrick Gage(Director)Keith Maher(Director)

Co-investorsBay City CapitalF-Prime CapitalExcel Venture ManagementMediphase Venture Partners

Other

Tracked investments with no reachable website or further public details — typically companies that wound down, renamed, or were absorbed.

Pronutria BiosciencesSeventh Sense Biosystems

Exits · 5

4 IPOs · 1 acquisitions · showing 4

Agios PharmaceuticalsNASDAQ: AGIODenali TherapeuticsNASDAQ: DNLIEditas MedicineNASDAQ: EDITTetraphase Pharmaceuticalsacq. by La Jolla Pharmaceutical Company

Fund performance · per public LP disclosures · 2

as of Dec 2025
FundVintageCommittedNet IRRTVPIDPI
Flagship Pioneering – Origination Fund VII, L.P.LPs: Texas Municipal Retirement System, Michigan Municipal Employees' Retirement System——12.6%1.33x0.00x
Flagship Pioneering Fund VIII, L.P.LPs: Michigan Municipal Employees' Retirement System, Texas Municipal Retirement System——18.1%1.17x0.00x

Source: public limited-partner disclosures (CalPERS, CalSTRS). Net IRR / TVPI / DPI as reported by the limited partner; a fund's early-year IRR is an interim estimate (J-curve).

IPO stake values · per SEC filings · 2

Value of this firm's stake in each portfolio company at its IPO price, from the prospectus principal-stockholder table.

CompanyOwnedIPO priceAt IPOStake value
Denali Therapeutics10.1%$18.00Dec 2017$160.5M
Editas Medicine13.9%$16.00Feb 2016$79.3M

Source: SEC S-1 / 424B prospectus filings. Stake value = shares beneficially owned × the initial public offering price, as disclosed — a market value at IPO, not a return multiple (the firm's original cost is not disclosed).

Frequently asked questions

How many investments has Flagship Ventures made?
Flagship Ventures has 11 tracked investments, 5 of which have exited.
Where is Flagship Ventures located?
Flagship Ventures is headquartered in Cambridge, US.

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